Schedule:
| Game | Date | Away Team (Rank) | Away Score | Home Team (Rank) | Home Score | Game Status | Result | Margin |
|---|---|---|---|---|---|---|---|---|
| 1 | 2016-09-02 | Northwestern State | 7 | Baylor | 55 | Final | W | 48 |
| 2 | 2016-09-10 | SMU (113) | 13 | Baylor (16) | 40 | Final | W | 27 |
| 3 | 2016-09-16 | Baylor (16) | 38 | Rice (115) | 10 | Final | W | 28 |
| 4 | 2016-09-24 | Oklahoma State (38) | 24 | Baylor (17) | 35 | Final | W | 11 |
| 5 | 2016-10-01 | Baylor (15) | 45 | Iowa State (121) | 42 | Final | W | 3 |
| 6 | 2016-10-15 | Kansas (114) | 7 | Baylor (16) | 49 | Final | W | 42 |
| 7 | 2016-10-29 | Baylor (14) | 34 | Texas (77) | 35 | Final | L | -1 |
| 8 | 2016-11-05 | TCU (75) | 62 | Baylor (26) | 22 | Final | L | -40 |
| 9 | 2016-11-12 | Baylor (44) | 24 | Oklahoma (19) | 45 | Final | L | -21 |
| 10 | 2016-11-19 | Kansas State (53) | 42 | Baylor (51) | 21 | Final | L | -21 |
| 11 | 2016-11-25 | Baylor (53) | 35 | Texas Tech (85) | 54 | Final | L | -19 |
| 12 | 2016-12-03 | Baylor (63) | 21 | West Virginia (20) | 24 | Final | L | -3 |
| 13 | 2016-12-27 | Boise State (15) | 12 | Baylor (70) | 31 | Final | W | 19 |