Schedule:
| Game | Date | Away Team (Rank) | Away Score | Home Team (Rank) | Home Score | Game Status | Result | Margin |
|---|---|---|---|---|---|---|---|---|
| 1 | 2016-09-03 | Holy Cross | 51 | Morgan State | 24 | Final | L | -27 |
| 2 | 2016-09-10 | Morgan State | 0 | Marshall | 62 | Final | L | -62 |
| 3 | 2016-09-24 | Howard | 24 | Morgan State | 28 | Final | W | 4 |
| 4 | 2016-10-01 | Delaware State | 17 | Morgan State | 20 | Final | W | 3 |
| 5 | 2016-10-08 | Morgan State | 0 | Savannah State | 0 | Postponed | - | - |
| 6 | 2016-10-15 | Morgan State | 12 | Hampton | 21 | Final | L | -9 |
| 7 | 2016-10-22 | North Carolina Central | 21 | Morgan State | 17 | Final | L | -4 |
| 8 | 2016-10-29 | Morgan State (235) | 14 | Norfolk State (247) | 27 | Final | L | -13 |
| 9 | 2016-11-05 | Bethune-Cookman (220) | 41 | Morgan State (242) | 10 | Final | L | -31 |
| 10 | 2016-11-12 | Morgan State (243) | 21 | Florida A&M (227) | 22 | Final | L | -1 |
| 11 | 2016-11-19 | Morgan State (246) | 3 | Army (86) | 60 | Final | L | -57 |
| 12 | 2016-11-26 | Morgan State (246) | 35 | Savannah State (224) | 24 | Final | W | 11 |