Schedule:
| Game | Date | Away Team (Rank) | Away Score | Home Team (Rank) | Home Score | Game Status | Result | Margin |
|---|---|---|---|---|---|---|---|---|
| 1 | 2016-09-03 | New Hampshire | 0 | San Diego State | 31 | Final | W | 31 |
| 2 | 2016-09-10 | California | 40 | San Diego State | 45 | Final | W | 5 |
| 3 | 2016-09-17 | San Diego State | 42 | Northern Illinois | 28 | Final | W | 14 |
| 4 | 2016-10-01 | San Diego State (31) | 24 | South Alabama (91) | 42 | Final | L | -18 |
| 5 | 2016-10-08 | UNLV (104) | 7 | San Diego State (55) | 26 | Final | W | 19 |
| 6 | 2016-10-14 | San Diego State (55) | 17 | Fresno State (123) | 3 | Final | W | 14 |
| 7 | 2016-10-21 | San Jose State (119) | 3 | San Diego State (47) | 42 | Final | W | 39 |
| 8 | 2016-10-28 | San Diego State (42) | 40 | Utah State (88) | 13 | Final | W | 27 |
| 9 | 2016-11-05 | Hawaii | 0 | San Diego State | 55 | Final | W | 55 |
| 10 | 2016-11-12 | San Diego State (34) | 46 | Nevada (134) | 16 | Final | W | 30 |
| 11 | 2016-11-19 | San Diego State (29) | 33 | Wyoming (35) | 34 | Final | L | -1 |
| 12 | 2016-11-26 | Colorado State (57) | 63 | San Diego State (41) | 31 | Final | L | -32 |
| 13 | 2016-12-03 | San Diego State (48) | 27 | Wyoming (43) | 24 | Final | W | 3 |
| 14 | 2016-12-17 | Houston (21) | 10 | San Diego State (43) | 34 | Final | W | 24 |